Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS00155 | Not Available | Positive | 37941 - 38267 | 11825.1 |
| hypothetical protein | RHPLAN_RS38905 | Not Available | Positive | 38286 - 38684 | 14711.8 |
| cell wall metabolism sensor histidine kinase walk | RHPLAN_RS00160 | Not Available | Negative | 38966 - 40345 | 48863.5 |
| response regulator transcription factor | RHPLAN_RS00165 | Not Available | Negative | 40346 - 41017 | 24023.4 |
| lyse family translocator | RHPLAN_RS00170 | Not Available | Positive | 41314 - 41934 | 21958.3 |
| cytochrome c | RHPLAN_RS00175 | Not Available | Negative | 41949 - 42374 | 15626.2 |
| hypothetical protein | RHPLAN_RS00180 | Not Available | Negative | 42434 - 43477 | 38083.6 |
| cytochrome b | RHPLAN_RS00185 | Not Available | Negative | 43366 - 43905 | 19952.7 |
| duf2267 domain-containing protein | RHPLAN_RS00190 | Not Available | Negative | 43971 - 44429 | 17452.0 |
| chaperonin groel | RHPLAN_RS00195 | Not Available | Negative | 44454 - 46076 | 58041.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.