Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | RHPLAN_RS01875 | Not Available | Negative | 410244 - 411227 | 35451.0 |
| 30s ribosomal protein s1 | RHPLAN_RS01880 | Not Available | Negative | 411604 - 413319 | 63108.3 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS01885 | Not Available | Negative | 413786 - 414778 | 35290.2 |
| guanitoxin biosynthesis mbl fold metallo-hydrolase gnth | RHPLAN_RS01890 | Not Available | Negative | 414808 - 415863 | 39293.6 |
| marr family winged helix-turn-helix transcriptional regulator | RHPLAN_RS01895 | Not Available | Negative | 415866 - 416399 | 19485.8 |
| (d)cmp kinase | RHPLAN_RS01900 | Not Available | Negative | 416486 - 417109 | 21987.3 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | RHPLAN_RS01905 | Not Available | Negative | 417254 - 418594 | 46572.6 |
| tigr02300 family protein | RHPLAN_RS01910 | Not Available | Positive | 418749 - 419171 | 14611.4 |
| Trna-ala | Not Available | Not Available | Positive | 419233 - 419308 | Not Available |
| amidohydrolase family protein | RHPLAN_RS01920 | Not Available | Positive | 419457 - 420437 | 37226.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.