Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
folylpolyglutamate synthase/dihydrofolate synthase family proteinRHPLAN_RS01825Not AvailableNegative401612 - 40292846704.9
acetyl-coa carboxylase, carboxyltransferase subunit betaRHPLAN_RS01830Not AvailableNegative402957 - 40387433160.4
tryptophan synthase subunit alphaRHPLAN_RS01835Not AvailableNegative403961 - 40480629613.9
hypothetical proteinRHPLAN_RS01840Not AvailableNegative404803 - 40507210737.5
tryptophan synthase subunit betaRHPLAN_RS01845Not AvailableNegative405072 - 40628944006.1
phosphoribosylanthranilate isomeraseRHPLAN_RS01850Not AvailableNegative406286 - 40695724034.3
eal domain-containing proteinRHPLAN_RS01855Not AvailableNegative407079 - 40821241843.7
ornithine cyclodeaminase family proteinRHPLAN_RS01860Not AvailableNegative408497 - 40945034092.5
lipopolysaccharide assembly protein lapa domain-containing proteinRHPLAN_RS01865Not AvailableNegative409465 - 40981812820.1
integration host factor subunit betaRHPLAN_RS01870Not AvailableNegative409878 - 41019811742.9

Displaying genes 371 – 380 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.