Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gmc family oxidoreductaseRHPLAN_RS01775Not AvailableNegative385108 - 38671858516.6
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabcRHPLAN_RS01780Not AvailablePositive386843 - 38825849821.3
dutp diphosphataseRHPLAN_RS01785Not AvailablePositive388255 - 38874917510.3
rrf2 family transcriptional regulatorRHPLAN_RS01790Not AvailablePositive388802 - 38923015354.8
atp-binding proteinRHPLAN_RS01795Not AvailablePositive389374 - 39188791261.0
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeRHPLAN_RS01800Not AvailablePositive391964 - 39358359086.9
nucleotidyltransferase family proteinRHPLAN_RS01805Not AvailablePositive393590 - 39433926823.8
double-strand break repair protein addbRHPLAN_RS01810Not AvailablePositive394659 - 397724112210.0
double-strand break repair helicase addaRHPLAN_RS01815Not AvailablePositive397721 - 401137125911.0
thioredoxinRHPLAN_RS01820Not AvailablePositive401226 - 40154611543.1

Displaying genes 361 – 370 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.