Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna epoxyqueuosine(34) reductase queg | RHPLAN_RS01680 | Not Available | Negative | 360466 - 361635 | 42229.8 |
| glutathione s-transferase family protein | RHPLAN_RS01685 | Not Available | Negative | 361587 - 362279 | 26285.4 |
| undecaprenyl-diphosphate phosphatase | RHPLAN_RS01690 | Not Available | Positive | 362517 - 363323 | 29473.8 |
| diguanylate cyclase | RHPLAN_RS01695 | Not Available | Negative | 363445 - 364986 | 55716.0 |
| complex i ndufa9 subunit family protein | RHPLAN_RS01700 | Not Available | Negative | 365932 - 366909 | 34958.3 |
| Trna-leu | Not Available | Not Available | Positive | 367131 - 367215 | Not Available |
| hypothetical protein | RHPLAN_RS01710 | Not Available | Positive | 367946 - 368284 | 13272.0 |
| cytochrome c | RHPLAN_RS38075 | Not Available | Positive | 369032 - 369424 | 14388.4 |
| glycosyltransferase family 10 fucosyltransferase | RHPLAN_RS01715 | Not Available | Positive | 369529 - 370461 | 35552.0 |
| acyltransferase family protein | RHPLAN_RS01720 | Not Available | Negative | 370584 - 371711 | 41841.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.