Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylalanine--trna ligase subunit betaRHPLAN_RS01630Not AvailableNegative350653 - 35307686517.5
phenylalanine--trna ligase subunit alphaRHPLAN_RS01635Not AvailableNegative353073 - 35415539829.8
hypothetical proteinRHPLAN_RS01640Not AvailablePositive354294 - 35469214593.7
50s ribosomal protein l20RHPLAN_RS01645Not AvailableNegative354814 - 35518813981.3
50s ribosomal protein l35RHPLAN_RS01650Not AvailableNegative355292 - 3554927531.49
translation initiation factor if-3RHPLAN_RS01655Not AvailableNegative355726 - 35626520763.4
glycosyltransferaseRHPLAN_RS01660Not AvailableNegative356430 - 35763844046.3
carboxylesteraseRHPLAN_RS01665Not AvailablePositive357758 - 35855228868.6
nad-dependent epimerase/dehydratase family proteinRHPLAN_RS01670Not AvailableNegative358541 - 35942231752.7
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS01675Not AvailableNegative359430 - 36040434486.8

Displaying genes 331 – 340 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.