Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional helix-turn-helix domain-containing protein/methylated-dna--[protein]-cysteine s-methyltransferase | RHPLAN_RS01580 | Not Available | Negative | 339917 - 340810 | 32537.0 |
| duf2244 domain-containing protein | RHPLAN_RS01585 | Not Available | Negative | 340862 - 341386 | 19131.1 |
| endonuclease iii | RHPLAN_RS01590 | Not Available | Positive | 341410 - 342237 | 30087.2 |
| sulfate transporter family protein | RHPLAN_RS01595 | Not Available | Negative | 342227 - 342970 | 27006.1 |
| yiix/yebb-like n1pc/p60 family cysteine hydrolase | RHPLAN_RS01600 | Not Available | Negative | 343045 - 343863 | 30685.1 |
| nad(p)/fad-dependent oxidoreductase | RHPLAN_RS01605 | Not Available | Positive | 344077 - 345597 | 53678.8 |
| s9 family peptidase | RHPLAN_RS01610 | Not Available | Negative | 345608 - 346768 | 42809.3 |
| ubid family decarboxylase | RHPLAN_RS01615 | Not Available | Negative | 346977 - 348539 | 57319.9 |
| voc family protein | RHPLAN_RS01620 | Not Available | Positive | 348691 - 349563 | 31776.6 |
| voc family protein | RHPLAN_RS01625 | Not Available | Positive | 349560 - 350417 | 32351.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.