Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnak | RHPLAN_RS01530 | Not Available | Positive | 329814 - 331733 | 68412.6 |
| molecular chaperone dnaj | RHPLAN_RS01535 | Not Available | Positive | 331898 - 333034 | 40699.1 |
| class i sam-dependent methyltransferase | RHPLAN_RS01540 | Not Available | Positive | 333220 - 333768 | 20007.6 |
| nadph-dependent fmn reductase | RHPLAN_RS01545 | Not Available | Positive | 333882 - 334463 | 20794.0 |
| orotidine-5'-phosphate decarboxylase | RHPLAN_RS01550 | Not Available | Positive | 334463 - 335158 | 23887.9 |
| duf1330 domain-containing protein | RHPLAN_RS40070 | Not Available | Positive | 335172 - 335798 | 23155.2 |
| duf1330 domain-containing protein | RHPLAN_RS01560 | Not Available | Positive | 335815 - 336117 | 11270.4 |
| 4-hydroxy-tetrahydrodipicolinate reductase | RHPLAN_RS01565 | Not Available | Positive | 336134 - 336949 | 27865.8 |
| is110 family transposase | RHPLAN_RS01570 | Not Available | Negative | 337139 - 338071 | 33722.4 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | RHPLAN_RS01575 | Not Available | Negative | 338292 - 339818 | 54512.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.