Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (cytidine(1402)-2'-o)-methyltransferaseRHPLAN_RS01480Not AvailableNegative318640 - 31955732373.6
penicillin-binding protein activatorRHPLAN_RS01485Not AvailablePositive319696 - 32093142621.8
b12-binding domain-containing radical sam proteinRHPLAN_RS01490Not AvailableNegative321017 - 32258560268.3
radical sam family heme chaperone hemwRHPLAN_RS01495Not AvailableNegative322709 - 32388142472.3
rdgb/ham1 family non-canonical purine ntp pyrophosphataseRHPLAN_RS01500Not AvailableNegative323960 - 32461623400.8
ribonuclease phRHPLAN_RS01505Not AvailableNegative324618 - 32533126067.4
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS01510Not AvailableNegative325431 - 32639333885.0
heat-inducible transcriptional repressor hrcaRHPLAN_RS01515Not AvailablePositive326479 - 32758840108.3
nucleotide exchange factor grpeRHPLAN_RS01520Not AvailablePositive327669 - 32826221416.3
hypothetical proteinRHPLAN_RS01525Not AvailableNegative328275 - 32924935029.5

Displaying genes 301 – 310 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.