Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yifb family mg chelatase-like aaa atpase | RHPLAN_RS01435 | Not Available | Negative | 309127 - 310668 | 53484.8 |
| is1595 family transposase | RHPLAN_RS01440 | Not Available | Positive | 310814 - 311749 | 35357.6 |
| duf3800 domain-containing protein | RHPLAN_RS01445 | Not Available | Negative | 311936 - 312742 | 31076.5 |
| hypothetical protein | RHPLAN_RS38935 | Not Available | Positive | 312741 - 312938 | 7620.11 |
| hypothetical protein | RHPLAN_RS01450 | Not Available | Negative | 313893 - 314072 | 6585.81 |
| hypothetical protein | RHPLAN_RS01455 | Not Available | Positive | 314228 - 314413 | 7039.37 |
| glutathione s-transferase family protein | RHPLAN_RS01460 | Not Available | Positive | 314515 - 315378 | 32038.3 |
| glutathione synthase | RHPLAN_RS01465 | Not Available | Negative | 315437 - 316381 | 35033.4 |
| methyl-accepting chemotaxis protein | RHPLAN_RS01470 | Not Available | Positive | 316467 - 318143 | 59841.8 |
| yran family protein | RHPLAN_RS01475 | Not Available | Negative | 318267 - 318656 | 14011.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.