Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium-translocating p-type atpase | RHPLAN_RS00105 | Not Available | Negative | 24945 - 27536 | 92652.7 |
| alpha/beta hydrolase | RHPLAN_RS00110 | Not Available | Negative | 27514 - 29379 | 69640.1 |
| hsp20/alpha crystallin family protein | RHPLAN_RS00115 | Not Available | Negative | 29672 - 30208 | 20038.7 |
| cbs domain-containing protein | RHPLAN_RS00120 | Not Available | Negative | 30299 - 30985 | 24828.2 |
| hypothetical protein | RHPLAN_RS00125 | Not Available | Negative | 31095 - 31454 | 13406.3 |
| mlae family lipid abc transporter permease subunit | RHPLAN_RS00130 | Not Available | Positive | 31618 - 32754 | 40352.1 |
| abc transporter atp-binding protein | RHPLAN_RS00135 | Not Available | Positive | 32757 - 33545 | 28132.3 |
| abc-type transport auxiliary lipoprotein family protein | RHPLAN_RS00140 | Not Available | Positive | 33551 - 34678 | 39208.0 |
| arac family transcriptional regulator | RHPLAN_RS00145 | Not Available | Negative | 34696 - 35685 | 36755.1 |
| methyl-accepting chemotaxis protein | RHPLAN_RS00150 | Not Available | Positive | 36010 - 37884 | 67765.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.