Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imidazole glycerol phosphate synthase subunit hisfRHPLAN_RS01385Not AvailablePositive299350 - 30012627523.9
2-hydroxychromene-2-carboxylate isomeraseRHPLAN_RS01390Not AvailableNegative300123 - 30072822617.7
phosphoribosyl-atp diphosphataseRHPLAN_RS01395Not AvailablePositive300821 - 30114411754.0
type i pantothenate kinaseRHPLAN_RS01400Not AvailablePositive301153 - 30210636162.6
atp-binding proteinRHPLAN_RS01405Not AvailableNegative302117 - 30435780414.1
hypothetical proteinRHPLAN_RS01410Not AvailableNegative304517 - 30499917302.5
cupin domain-containing proteinRHPLAN_RS01415Not AvailablePositive305114 - 30614237731.6
trap transporter substrate-binding proteinRHPLAN_RS01420Not AvailablePositive306218 - 30723436719.4
trap transporter small permeaseRHPLAN_RS01425Not AvailablePositive307245 - 30775118704.6
trap transporter large permeaseRHPLAN_RS01430Not AvailablePositive307748 - 30905546284.7

Displaying genes 281 – 290 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.