Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinRHPLAN_RS01190Not AvailablePositive263712 - 26442225583.2
leucine--trna ligaseRHPLAN_RS01195Not AvailablePositive264515 - 26713998179.2
lps assembly lipoprotein lpteRHPLAN_RS01200Not AvailablePositive267126 - 26769220210.3
dna polymerase iii subunit deltaRHPLAN_RS01205Not AvailablePositive267741 - 26877236447.8
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS01210Not AvailablePositive268844 - 26982733594.5
abc transporter substrate-binding proteinRHPLAN_RS01215Not AvailablePositive269845 - 27082534947.8
parb/repb/spo0j family partition proteinRHPLAN_RS01220Not AvailableNegative270832 - 27172232253.5
para family proteinRHPLAN_RS01225Not AvailableNegative271852 - 27280833868.8
16s rrna (guanine(527)-n(7))-methyltransferase rsmgRHPLAN_RS01230Not AvailableNegative272815 - 27349524689.8
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgRHPLAN_RS01235Not AvailableNegative273509 - 27537767053.2

Displaying genes 241 – 250 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.