Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ammonium transporterRHPLAN_RS01090Not AvailablePositive238686 - 24017651294.6
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeRHPLAN_RS01095Not AvailablePositive240518 - 24172943680.3
dna translocase ftskRHPLAN_RS01100Not AvailablePositive241809 - 24427489151.3
outer membrane lipoprotein carrier protein lolaRHPLAN_RS01105Not AvailablePositive244402 - 24526531546.5
exodeoxyribonuclease iiiRHPLAN_RS01110Not AvailablePositive245542 - 24635730687.0
abc transporter substrate-binding proteinRHPLAN_RS01115Not AvailablePositive246422 - 24741437437.3
cyclic nucleotide-binding domain-containing proteinRHPLAN_RS01120Not AvailableNegative247422 - 24788616518.0
response regulator transcription factorRHPLAN_RS01125Not AvailableNegative247956 - 24864225301.5
l,d-transpeptidaseRHPLAN_RS01130Not AvailablePositive248749 - 24927919369.8
atp-binding proteinRHPLAN_RS01135Not AvailablePositive249444 - 25139670323.4

Displaying genes 221 – 230 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.