Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | RHPLAN_RS01040 | Not Available | Positive | 230309 - 231226 | 32405.8 |
| lon peptidase substrate-binding domain-containing protein | RHPLAN_RS01045 | Not Available | Positive | 231262 - 231939 | 24538.9 |
| trm112 family protein | RHPLAN_RS01050 | Not Available | Positive | 231952 - 232152 | 7321.89 |
| glutathione s-transferase family protein | RHPLAN_RS01055 | Not Available | Positive | 232305 - 232931 | 23639.6 |
| ubiquinone biosynthesis hydroxylase | RHPLAN_RS01060 | Not Available | Negative | 233088 - 234356 | 45485.8 |
| hypothetical protein | RHPLAN_RS01065 | Not Available | Positive | 234412 - 235152 | 26681.3 |
| acyl-coa thioesterase ii | RHPLAN_RS01070 | Not Available | Positive | 235185 - 236090 | 33735.3 |
| p-ii family nitrogen regulator | RHPLAN_RS01075 | Not Available | Positive | 236266 - 236604 | 12073.7 |
| ammonium transporter | RHPLAN_RS01080 | Not Available | Positive | 236713 - 237981 | 44018.6 |
| p-ii family nitrogen regulator | RHPLAN_RS01085 | Not Available | Positive | 238309 - 238647 | 12083.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.