Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase/muconate lactonizing enzyme family protein | RHPLAN_RS00985 | Not Available | Positive | 220211 - 221317 | 40906.8 |
| alpha/beta hydrolase | RHPLAN_RS00990 | Not Available | Positive | 221468 - 222433 | 35747.9 |
| gamma-glutamyltransferase | RHPLAN_RS00995 | Not Available | Positive | 222444 - 224180 | 61620.1 |
| is630 family transposase | RHPLAN_RS38060 | Not Available | Negative | 224191 - 225139 | 35933.7 |
| large conductance mechanosensitive channel protein mscl | RHPLAN_RS01010 | Not Available | Positive | 225476 - 225889 | 14629.3 |
| hypothetical protein | RHPLAN_RS01015 | Not Available | Positive | 225914 - 227002 | 39923.0 |
| hypothetical protein | RHPLAN_RS01020 | Not Available | Negative | 227660 - 227905 | 8795.52 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | RHPLAN_RS01025 | Not Available | Positive | 228290 - 229114 | 30597.8 |
| Trna-gly | Not Available | Not Available | Positive | 229290 - 229364 | Not Available |
| prolyl-trna synthetase associated domain-containing protein | RHPLAN_RS01035 | Not Available | Positive | 229518 - 230027 | 18378.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.