Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uroporphyrinogen-iii synthaseRHPLAN_RS00885Not AvailableNegative195910 - 19661724981.1
hydroxymethylbilane synthaseRHPLAN_RS00890Not AvailableNegative196619 - 19754832731.6
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadRHPLAN_RS00895Not AvailablePositive197610 - 19868637238.1
nad(p)h-dependent glycerol-3-phosphate dehydrogenaseRHPLAN_RS00900Not AvailablePositive198706 - 19969534002.2
eve domain-containing proteinRHPLAN_RS00905Not AvailablePositive199722 - 20014415688.1
duf1761 domain-containing proteinRHPLAN_RS00910Not AvailablePositive200170 - 20059514885.6
fad-dependent oxidoreductaseRHPLAN_RS00915Not AvailablePositive200663 - 20188344469.0
glycosyltransferase family a proteinRHPLAN_RS00920Not AvailablePositive201893 - 20295140703.5
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS00925Not AvailableNegative203011 - 20397934118.5
acetate--coa ligaseRHPLAN_RS00930Not AvailablePositive204194 - 20616773146.9

Displaying genes 181 – 190 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.