Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS00790 | Not Available | Negative | 173734 - 174306 | 22002.9 |
| cupin domain-containing protein | RHPLAN_RS00795 | Not Available | Negative | 174321 - 174914 | 22136.3 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS00800 | Not Available | Positive | 175101 - 176123 | 36857.6 |
| thiamine pyrophosphate-binding protein | RHPLAN_RS00805 | Not Available | Positive | 176153 - 177907 | 65481.8 |
| hypothetical protein | RHPLAN_RS00810 | Not Available | Negative | 177993 - 179024 | 37908.7 |
| hypothetical protein | RHPLAN_RS38925 | Not Available | Positive | 179241 - 179468 | 8171.34 |
| class ii aldolase/adducin family protein | RHPLAN_RS00815 | Not Available | Positive | 179591 - 180334 | 27327.0 |
| amidohydrolase family protein | RHPLAN_RS00820 | Not Available | Positive | 180338 - 181285 | 35307.5 |
| multidrug effflux mfs transporter | RHPLAN_RS00825 | Not Available | Positive | 181285 - 182490 | 42929.6 |
| nad(p)-dependent oxidoreductase | RHPLAN_RS00830 | Not Available | Negative | 182487 - 183338 | 30027.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.