Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine ammonia-lyase reactivating factor euta | RHPLAN_RS00690 | Not Available | Positive | 156569 - 158077 | 52840.5 |
| non-heme iron oxygenase ferredoxin subunit | RHPLAN_RS00695 | Not Available | Negative | 158120 - 158431 | 11183.2 |
| rieske 2fe-2s domain-containing protein | RHPLAN_RS00700 | Not Available | Positive | 158598 - 159881 | 47911.0 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | RHPLAN_RS00705 | Not Available | Positive | 159950 - 160456 | 17846.3 |
| psif family protein | RHPLAN_RS00710 | Not Available | Positive | 160471 - 160695 | 7753.49 |
| lysr substrate-binding domain-containing protein | RHPLAN_RS00715 | Not Available | Negative | 160703 - 161572 | 31543.9 |
| isoprenylcysteine carboxylmethyltransferase family protein | RHPLAN_RS00720 | Not Available | Positive | 161677 - 162183 | 18482.3 |
| sulfite exporter taue/safe family protein | RHPLAN_RS00725 | Not Available | Positive | 162264 - 163022 | 27163.3 |
| iclr family transcriptional regulator | RHPLAN_RS00730 | Not Available | Negative | 163162 - 164004 | 30289.9 |
| nad(p)/fad-dependent oxidoreductase | RHPLAN_RS00735 | Not Available | Positive | 164127 - 165344 | 42565.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.