Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coce/nond family hydrolase | RHPLAN_RS00640 | Not Available | Negative | 144925 - 146607 | 62919.6 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS00645 | Not Available | Negative | 146749 - 147747 | 35186.6 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS00650 | Not Available | Negative | 147786 - 148775 | 35469.2 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS00655 | Not Available | Negative | 148804 - 149799 | 35364.1 |
| tripartite tricarboxylate transporter substrate-binding protein | RHPLAN_RS00660 | Not Available | Negative | 149814 - 150794 | 33894.8 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS00665 | Not Available | Negative | 150887 - 151879 | 34504.6 |
| cupin domain-containing protein | RHPLAN_RS00670 | Not Available | Positive | 152102 - 153244 | 42376.1 |
| cupin domain-containing protein | RHPLAN_RS00675 | Not Available | Positive | 153325 - 154542 | 45767.1 |
| class ii aldolase/adducin family protein | RHPLAN_RS00680 | Not Available | Negative | 154688 - 155455 | 27984.9 |
| amidohydrolase family protein | RHPLAN_RS00685 | Not Available | Positive | 155568 - 156560 | 35642.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.