Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS00590 | Not Available | Positive | 132037 - 132258 | 7751.27 |
| crp/fnr family transcriptional regulator | RHPLAN_RS00595 | Not Available | Positive | 132389 - 133060 | 23986.0 |
| tetratricopeptide repeat protein | RHPLAN_RS00600 | Not Available | Positive | 133367 - 135895 | 94850.6 |
| acyl-[acp]--phospholipid o-acyltransferase | RHPLAN_RS00605 | Not Available | Negative | 135919 - 139332 | 120957.0 |
| yiaa/yiab family inner membrane protein | RHPLAN_RS00610 | Not Available | Negative | 139478 - 139756 | 10261.8 |
| pspa/im30 family protein | RHPLAN_RS00615 | Not Available | Negative | 139772 - 140500 | 26137.0 |
| tetr/acrr family transcriptional regulator | RHPLAN_RS00620 | Not Available | Positive | 140612 - 141220 | 22205.7 |
| mfs transporter | RHPLAN_RS00625 | Not Available | Positive | 141336 - 142715 | 49543.6 |
| tripartite tricarboxylate transporter permease | RHPLAN_RS00630 | Not Available | Negative | 142723 - 144228 | 52560.7 |
| tripartite tricarboxylate transporter tctb family protein | RHPLAN_RS38055 | Not Available | Negative | 144232 - 144720 | 17229.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.