Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | RHPLAN_RS05970 | Not Available | Negative | 1296793 - 1297908 | 40394.1 |
| gfo/idh/moca family protein | RHPLAN_RS05975 | Not Available | Negative | 1298087 - 1299190 | 40680.2 |
| coa-transferase | RHPLAN_RS05980 | Not Available | Negative | 1299263 - 1300030 | 27733.0 |
| coa transferase subunit a | RHPLAN_RS05985 | Not Available | Negative | 1300234 - 1301064 | 29874.1 |
| methylenetetrahydrofolate reductase | RHPLAN_RS05990 | Not Available | Positive | 1301162 - 1302061 | 31488.6 |
| molybdopterin cofactor-binding domain-containing protein | RHPLAN_RS05995 | Not Available | Negative | 1302276 - 1304555 | 81618.5 |
| (2fe-2s)-binding protein | RHPLAN_RS06000 | Not Available | Negative | 1304567 - 1305034 | 16507.1 |
| cytochrome p450 | RHPLAN_RS06005 | Not Available | Negative | 1305179 - 1306426 | 46333.8 |
| hd domain-containing protein | RHPLAN_RS06010 | Not Available | Negative | 1306499 - 1307326 | 31314.1 |
| abc transporter atp-binding protein | RHPLAN_RS06015 | Not Available | Positive | 1307525 - 1308280 | 27716.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.