Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gephyrin-like molybdotransferase glpRHPLAN_RS05820Not AvailableNegative1264326 - 126560044660.8
molybdopterin-guanine dinucleotide biosynthesis protein bRHPLAN_RS05825Not AvailableNegative1265600 - 126612718982.0
hypothetical proteinRHPLAN_RS05830Not AvailablePositive1266258 - 126654210208.5
pepsy domain-containing proteinRHPLAN_RS05835Not AvailablePositive1266873 - 126715710005.0
cytochrome b/b6 domain-containing proteinRHPLAN_RS05840Not AvailablePositive1267197 - 126775420730.7
molybdopterin biosynthesis proteinRHPLAN_RS05845Not AvailableNegative1267751 - 126973069110.0
molybdopterin-binding proteinRHPLAN_RS05850Not AvailableNegative1269730 - 127084238242.4
sulfurtransferase tusa family proteinRHPLAN_RS05855Not AvailablePositive1270911 - 12711659235.62
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS05860Not AvailableNegative1271313 - 127228134504.6
caib/baif coa-transferase family proteinRHPLAN_RS05865Not AvailablePositive1272445 - 127363843265.4

Displaying genes 1181 – 1190 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.