Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | RHPLAN_RS05675 | Not Available | Negative | 1234014 - 1237508 | 126760.0 |
| response regulator | RHPLAN_RS05680 | Not Available | Negative | 1237551 - 1238060 | 18037.0 |
| hypothetical protein | RHPLAN_RS39020 | Not Available | Positive | 1238288 - 1238449 | 6134.29 |
| pilz domain-containing protein | RHPLAN_RS05685 | Not Available | Positive | 1238656 - 1238958 | 11217.5 |
| sensor domain-containing diguanylate cyclase | RHPLAN_RS05690 | Not Available | Positive | 1239084 - 1240538 | 53283.9 |
| hypothetical protein | RHPLAN_RS39025 | Not Available | Positive | 1240587 - 1240958 | 13654.3 |
| methyl-accepting chemotaxis protein | RHPLAN_RS05700 | Not Available | Negative | 1240961 - 1242490 | 53967.5 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS05705 | Not Available | Negative | 1242761 - 1243726 | 33317.6 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS05710 | Not Available | Negative | 1243772 - 1244770 | 34262.6 |
| hypothetical protein | RHPLAN_RS05715 | Not Available | Negative | 1244889 - 1245110 | 8558.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.