Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmge/prpd family protein | RHPLAN_RS05625 | Not Available | Negative | 1222059 - 1223411 | 48760.4 |
| hypothetical protein | RHPLAN_RS05630 | Not Available | Negative | 1223567 - 1223818 | 9081.36 |
| hypothetical protein | RHPLAN_RS05635 | Not Available | Negative | 1223998 - 1224276 | 9726.35 |
| adenylate/guanylate cyclase domain-containing protein | RHPLAN_RS05640 | Not Available | Negative | 1224384 - 1226066 | 60130.5 |
| porin | RHPLAN_RS05645 | Not Available | Positive | 1226622 - 1228175 | 53079.9 |
| duf3551 domain-containing protein | RHPLAN_RS05650 | Not Available | Positive | 1228306 - 1228563 | 9067.67 |
| crp/fnr family transcriptional regulator | RHPLAN_RS05655 | Not Available | Positive | 1228569 - 1229267 | 25849.4 |
| glycosyltransferase family 2 protein | RHPLAN_RS05660 | Not Available | Negative | 1229467 - 1231596 | 78593.7 |
| hlyd family secretion protein | RHPLAN_RS05665 | Not Available | Negative | 1231627 - 1232919 | 47407.2 |
| response regulator transcription factor | RHPLAN_RS05670 | Not Available | Positive | 1233351 - 1233989 | 23111.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.