Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydantoinase b/oxoprolinase family protein | RHPLAN_RS05580 | Not Available | Negative | 1210877 - 1212544 | 59468.7 |
| hydantoinase/oxoprolinase family protein | RHPLAN_RS05585 | Not Available | Negative | 1212732 - 1214786 | 72899.0 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS05590 | Not Available | Positive | 1214959 - 1215936 | 33857.2 |
| gfo/idh/moca family protein | RHPLAN_RS05595 | Not Available | Positive | 1216029 - 1217180 | 43133.2 |
| dihydrodipicolinate synthase family protein | RHPLAN_RS05600 | Not Available | Positive | 1217274 - 1218437 | 42250.7 |
| sugar phosphate isomerase/epimerase | RHPLAN_RS05605 | Not Available | Positive | 1218437 - 1219267 | 29883.2 |
| duf3551 domain-containing protein | RHPLAN_RS05610 | Not Available | Negative | 1219281 - 1219526 | 8493.86 |
| cyclase family protein | RHPLAN_RS05615 | Not Available | Negative | 1219631 - 1220494 | 32280.6 |
| duf899 family protein | RHPLAN_RS05620 | Not Available | Positive | 1220603 - 1221322 | 27034.9 |
| hypothetical protein | RHPLAN_RS39015 | Not Available | Negative | 1221428 - 1221874 | 16211.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.