Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase family protein subunit m | RHPLAN_RS05525 | Not Available | Positive | 1198950 - 1199807 | 30455.7 |
| (2fe-2s)-binding protein | RHPLAN_RS05530 | Not Available | Positive | 1199813 - 1200277 | 16591.9 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RHPLAN_RS05535 | Not Available | Positive | 1200282 - 1202564 | 82780.1 |
| cupin domain-containing protein | RHPLAN_RS05540 | Not Available | Positive | 1202659 - 1203189 | 19620.4 |
| rida family protein | RHPLAN_RS05545 | Not Available | Positive | 1203352 - 1203840 | 17535.2 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS05550 | Not Available | Negative | 1203864 - 1204856 | 34446.7 |
| hypothetical protein | RHPLAN_RS05555 | Not Available | Positive | 1205028 - 1206020 | 37948.6 |
| tripartite tricarboxylate transporter substrate-binding protein | RHPLAN_RS05565 | Not Available | Positive | 1207737 - 1208705 | 34163.5 |
| aminopeptidase p family n-terminal domain-containing protein | RHPLAN_RS05570 | Not Available | Negative | 1208708 - 1209772 | 37751.1 |
| xaa-pro peptidase family protein | RHPLAN_RS05575 | Not Available | Negative | 1209783 - 1210880 | 39692.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.