Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase family protein | RHPLAN_RS05475 | Not Available | Positive | 1187511 - 1188119 | 22475.4 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS05480 | Not Available | Negative | 1188120 - 1189103 | 34410.6 |
| llm class flavin-dependent oxidoreductase | RHPLAN_RS05485 | Not Available | Negative | 1189176 - 1190207 | 38398.3 |
| acyl-coa dehydrogenase family protein | RHPLAN_RS05490 | Not Available | Negative | 1190278 - 1191489 | 45096.8 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS05495 | Not Available | Positive | 1191536 - 1192507 | 33810.8 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RHPLAN_RS05500 | Not Available | Positive | 1192672 - 1194957 | 82645.7 |
| acyl-coa dehydrogenase family protein | RHPLAN_RS05505 | Not Available | Positive | 1194989 - 1196176 | 42919.3 |
| eama family transporter | RHPLAN_RS05510 | Not Available | Positive | 1196198 - 1197106 | 32795.1 |
| gnat family n-acetyltransferase | RHPLAN_RS05515 | Not Available | Positive | 1197109 - 1197591 | 17902.5 |
| 4,5-dihydroxyphthalate decarboxylase | RHPLAN_RS05520 | Not Available | Negative | 1197811 - 1198797 | 37020.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.