Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter small permeaseRHPLAN_RS00490Not AvailableNegative107747 - 10826218827.3
trap transporter substrate-binding protein dctpRHPLAN_RS00495Not AvailableNegative108451 - 10945836659.8
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS00500Not AvailablePositive110493 - 11146433878.0
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabRHPLAN_RS00505Not AvailablePositive111760 - 11316051485.4
phoh family proteinRHPLAN_RS00510Not AvailablePositive113160 - 11420037629.1
rrna maturation rnase ybeyRHPLAN_RS00515Not AvailablePositive114197 - 11473019222.1
hemolysin family proteinRHPLAN_RS00520Not AvailablePositive114739 - 11591142218.1
apolipoprotein n-acyltransferaseRHPLAN_RS00525Not AvailablePositive115908 - 11753359000.1
helix-turn-helix domain-containing proteinRHPLAN_RS00530Not AvailablePositive117799 - 11820914945.1
methionine adenosyltransferaseRHPLAN_RS00535Not AvailablePositive118350 - 11961845849.5

Displaying genes 101 – 110 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.