Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | RHPLAN_RS05275 | Not Available | Positive | 1142761 - 1143102 | 11945.4 |
| sdr family nad(p)-dependent oxidoreductase | RHPLAN_RS05280 | Not Available | Positive | 1143286 - 1144089 | 27613.3 |
| 3-hydroxyacyl-coa dehydrogenase family protein | RHPLAN_RS05285 | Not Available | Positive | 1144093 - 1145010 | 33489.4 |
| abc transporter substrate-binding protein | RHPLAN_RS05290 | Not Available | Positive | 1145150 - 1146424 | 45289.1 |
| abc transporter atp-binding protein | RHPLAN_RS05295 | Not Available | Positive | 1146440 - 1147168 | 25701.4 |
| abc transporter atp-binding protein | RHPLAN_RS05300 | Not Available | Positive | 1147161 - 1147865 | 25043.6 |
| branched-chain amino acid abc transporter permease | RHPLAN_RS05305 | Not Available | Positive | 1147867 - 1148733 | 29749.5 |
| branched-chain amino acid abc transporter permease | RHPLAN_RS05310 | Not Available | Positive | 1148738 - 1149745 | 35518.5 |
| voc family protein | RHPLAN_RS05315 | Not Available | Positive | 1149834 - 1150811 | 36779.1 |
| hypothetical protein | RHPLAN_RS05320 | Not Available | Positive | 1150872 - 1151399 | 19654.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.