Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinRHPLAN_RS05030Not AvailableNegative1091752 - 109279236855.6
hypothetical proteinRHPLAN_RS05035Not AvailableNegative1092955 - 109365325257.3
abc transporter permeaseRHPLAN_RS05040Not AvailableNegative1093836 - 109469331254.1
abc transporter atp-binding proteinRHPLAN_RS05045Not AvailableNegative1094690 - 109548729213.6
gamma-glutamyltransferase family proteinRHPLAN_RS05050Not AvailableNegative1095599 - 109739264793.5
glutathione s-transferase family proteinRHPLAN_RS05055Not AvailablePositive1097571 - 109821524273.3
ubid family decarboxylaseRHPLAN_RS05060Not AvailableNegative1098370 - 109994758636.4
amidohydrolaseRHPLAN_RS05065Not AvailableNegative1100102 - 110102533920.6
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS05070Not AvailableNegative1101025 - 110201434353.6
sdr family nad(p)-dependent oxidoreductaseRHPLAN_RS05075Not AvailableNegative1102075 - 110286327940.5

Displaying genes 1021 – 1030 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.