Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | RHPLAN_RS04980 | Not Available | Negative | 1079547 - 1079933 | 14617.7 |
| ubix family flavin prenyltransferase | RHPLAN_RS04985 | Not Available | Negative | 1080156 - 1080743 | 21055.0 |
| tigr02444 family protein | RHPLAN_RS04990 | Not Available | Negative | 1080798 - 1081322 | 19096.7 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RHPLAN_RS04995 | Not Available | Negative | 1081319 - 1083667 | 83148.8 |
| lpg1974 family pore-forming outer membrane protein | RHPLAN_RS05000 | Not Available | Positive | 1083939 - 1084730 | 27665.3 |
| nad(p)/fad-dependent oxidoreductase | RHPLAN_RS05005 | Not Available | Negative | 1084721 - 1085929 | 43700.6 |
| gnat family n-acetyltransferase | RHPLAN_RS05010 | Not Available | Negative | 1085942 - 1087090 | 42154.7 |
| gnat family n-acetyltransferase | RHPLAN_RS05015 | Not Available | Positive | 1087435 - 1088667 | 45818.0 |
| polysaccharide biosynthesis c-terminal domain-containing protein | RHPLAN_RS05020 | Not Available | Negative | 1088896 - 1090290 | 50356.5 |
| xaa-pro peptidase family protein | RHPLAN_RS05025 | Not Available | Negative | 1090366 - 1091670 | 48684.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.