Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RHPLAN_RS04930 | Not Available | Negative | 1066934 - 1069123 | 78001.9 |
| (2fe-2s)-binding protein | RHPLAN_RS04935 | Not Available | Negative | 1069136 - 1069585 | 16070.3 |
| tonb-dependent siderophore receptor | RHPLAN_RS04940 | Not Available | Positive | 1069916 - 1072216 | 84127.8 |
| pepsy domain-containing protein | RHPLAN_RS04945 | Not Available | Positive | 1072213 - 1073361 | 42447.0 |
| hypothetical protein | RHPLAN_RS04950 | Not Available | Positive | 1073358 - 1073576 | 7997.08 |
| hypothetical protein | RHPLAN_RS04955 | Not Available | Positive | 1073763 - 1074131 | 13566.1 |
| hypothetical protein | RHPLAN_RS04960 | Not Available | Positive | 1074206 - 1075678 | 55138.8 |
| beta-1,6-n-acetylglucosaminyltransferase | RHPLAN_RS38195 | Not Available | Negative | 1075766 - 1076683 | 35116.1 |
| hypothetical protein | RHPLAN_RS04970 | Not Available | Negative | 1077564 - 1077770 | 7297.44 |
| ubid family decarboxylase | RHPLAN_RS04975 | Not Available | Negative | 1077864 - 1079540 | 60594.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.