Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS04880Not AvailableNegative1056581 - 105757334663.1
mmge/prpd family proteinRHPLAN_RS04885Not AvailableNegative1057687 - 105899746281.8
amidaseRHPLAN_RS04890Not AvailableNegative1059026 - 106041148371.4
sulfur oxidation c-type cytochrome soxaRHPLAN_RS04895Not AvailableNegative1060408 - 106119628975.6
thiosulfate oxidation carrier complex protein soxzRHPLAN_RS04900Not AvailableNegative1061193 - 106151611610.9
soxy-related aacie arm proteinRHPLAN_RS04905Not AvailableNegative1061516 - 106194114758.0
sulfur oxidation c-type cytochrome soxxRHPLAN_RS04910Not AvailableNegative1062090 - 106252415226.4
nad(p)/fad-dependent oxidoreductaseRHPLAN_RS04915Not AvailableNegative1062545 - 106379543780.0
molybdopterin cofactor-binding domain-containing proteinRHPLAN_RS04920Not AvailableNegative1064037 - 106622377823.5
(2fe-2s)-binding proteinRHPLAN_RS04925Not AvailableNegative1066235 - 106668416056.3

Displaying genes 991 – 1000 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.