Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorRHPLAN_RS00440Not AvailableNegative98147 - 9907033469.8
sdr family nad(p)-dependent oxidoreductaseRHPLAN_RS00445Not AvailablePositive99200 - 9993425218.3
mfs transporterRHPLAN_RS00450Not AvailablePositive99982 - 10119641110.1
cytochrome p460 family proteinRHPLAN_RS00455Not AvailableNegative101203 - 10169417775.4
abc transporter substrate-binding proteinRHPLAN_RS00460Not AvailablePositive101872 - 10287937705.0
aspartate/glutamate racemase family proteinRHPLAN_RS00465Not AvailablePositive102896 - 10368728819.9
duf4437 domain-containing proteinRHPLAN_RS00470Not AvailableNegative103707 - 10416515944.1
lysr family transcriptional regulatorRHPLAN_RS00475Not AvailablePositive104260 - 10525536975.8
cobalamin-independent methionine synthase ii family proteinRHPLAN_RS00480Not AvailableNegative105252 - 10643043491.4
trap transporter large permeaseRHPLAN_RS00485Not AvailableNegative106456 - 10775745546.6

Displaying genes 91 – 100 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.