Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio harveyi |
| Strain | 1DA3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1612541 bp
Thymine Count
1615277 bp
Guanine Count
1351618 bp
Cytosine Count
1350462 bp
Genome Length
5930024 bp
Protein-coding Genes
4946 genes
Non-Coding Genes
128 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase, e2 component, dihydrolipoamide acetyltransferase | VME_20060 | Not Available | Negative | 2357432 - 2359339 | 65905.7 |
| pyruvate dehydrogenase, e1 component | VME_20070 | Not Available | Negative | 2359370 - 2362033 | 99225.9 |
| transcriptional regulator of pyruvate dehydrogenase complex | VME_20080 | Not Available | Negative | 2362089 - 2362856 | 29044.7 |
| ampd protein | VME_20090 | Not Available | Negative | 2363261 - 2363812 | 20800.7 |
| nicotinate-nucleotide pyrophosphorylase | VME_20100 | Not Available | Positive | 2363905 - 2364792 | 32083.4 |
| conserved hypothetical protein | VME_20110 | Not Available | Positive | 2365057 - 2365521 | 15914.8 |
| type iv pilus assembly protein pilb | VME_20120 | Not Available | Positive | 2365521 - 2367206 | 62228.9 |
| type iv pilin biogenesis protein pilc | VME_20130 | Not Available | Positive | 2367240 - 2368463 | 44898.9 |
| leader peptidase pild | VME_20140 | Not Available | Positive | 2368536 - 2369405 | 32609.6 |
| conserved hypothetical protein | VME_20150 | Not Available | Positive | 2369406 - 2370020 | 22799.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
