Oceanithermus profundus DSM 14977

Gram-negativeBacilliNon-motileMicroaerophilic

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Thermales

Family

Thermaceae

Genus

Oceanithermus

Description

Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) is an moderately thermophilic, organotrophic, microaerophilic, facultatively chemolithotrophic, Gram-positive bacterium isolated from a deep-sea hydrothermal vent site at 13 degrees N in the East Pacific Rise. Cells are Gram-negative, non-motile rods. The organism grows in the temperature range between 40 and 68 degrees Celsius, with an optimum at 60 degrees Celsius, and in the pH range is between 5.5-8.4, with an optimum around pH 7.5. The NaCl concentration for growth is in the range 10-50 g/l, with an optimum at 30 g/l. O. profundus grows chemoorganoheterotrophically with carbohydrates, proteinaceous substrates, organic acids and alcohols using oxygen or nitrate as electron acceptor. Alternatively, it is able to grow lithoheterotrophically with molecular hydrogen as the energy source. (Adapted from PMID: 12807196). (EBI Integr8)

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderThermales
FamilyThermaceae
GenusOceanithermus
SpeciesOceanithermus profundus
StrainDSM 14977

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Oceanithermus profundus DSM 14977
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature60
Temperature rangeThermophilic
HabitatDeep sea- Hydrothermal vent- Marine
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganoheterotroph- Lithoheterotroph- Organotroph
PathogenicityNo

Genome Summary

Oceanithermus profundus DSM 14977, complete sequence.

Gene Summary

Adenine Count

345113 bp

Thymine Count

345497 bp

Guanine Count

806801 bp

Cytosine Count

806529 bp

Genome Length

2303940 bp

Protein-coding Genes

2254 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf86 domain-containing proteinOCEPR_RS00385Not AvailableNegative72151 - 7252213761.7
hypothetical proteinOCEPR_RS12945Not AvailableNegative72621 - 727795713.95
fggy family carbohydrate kinaseOCEPR_RS00390Not AvailableNegative72853 - 7428651417.2
30s ribosomal protein s1OCEPR_RS00395Not AvailablePositive74502 - 7629565358.9
phosphoribosyltransferaseOCEPR_RS00400Not AvailablePositive76364 - 7703524114.0
duf4405 domain-containing proteinOCEPR_RS12100Not AvailablePositive77104 - 7781125133.4
translational gtpase typaOCEPR_RS00410Not AvailablePositive77859 - 7966166517.1
dna cytosine methyltransferaseOCEPR_RS12450Not AvailablePositive79825 - 8079337159.8
a/g-specific adenine glycosylaseOCEPR_RS12455Not AvailablePositive80790 - 8145524684.1
disarm system helicase drmaOCEPR_RS12460Not AvailablePositive81445 - 85311142409.0

Displaying genes 81 – 90 of 2456 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.