Oceanithermus profundus DSM 14977

Gram-negativeBacilliNon-motileMicroaerophilic

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Thermales

Family

Thermaceae

Genus

Oceanithermus

Description

Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) is an moderately thermophilic, organotrophic, microaerophilic, facultatively chemolithotrophic, Gram-positive bacterium isolated from a deep-sea hydrothermal vent site at 13 degrees N in the East Pacific Rise. Cells are Gram-negative, non-motile rods. The organism grows in the temperature range between 40 and 68 degrees Celsius, with an optimum at 60 degrees Celsius, and in the pH range is between 5.5-8.4, with an optimum around pH 7.5. The NaCl concentration for growth is in the range 10-50 g/l, with an optimum at 30 g/l. O. profundus grows chemoorganoheterotrophically with carbohydrates, proteinaceous substrates, organic acids and alcohols using oxygen or nitrate as electron acceptor. Alternatively, it is able to grow lithoheterotrophically with molecular hydrogen as the energy source. (Adapted from PMID: 12807196). (EBI Integr8)

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderThermales
FamilyThermaceae
GenusOceanithermus
SpeciesOceanithermus profundus
StrainDSM 14977

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Oceanithermus profundus DSM 14977
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature60
Temperature rangeThermophilic
HabitatDeep sea- Hydrothermal vent- Marine
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganoheterotroph- Lithoheterotroph- Organotroph
PathogenicityNo

Genome Summary

Oceanithermus profundus DSM 14977, complete sequence.

Gene Summary

Adenine Count

345113 bp

Thymine Count

345497 bp

Guanine Count

806801 bp

Cytosine Count

806529 bp

Genome Length

2303940 bp

Protein-coding Genes

2254 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s9 family peptidaseOCEPR_RS12365Not AvailableNegative2211198 - 221300065806.6
trimethylamine-n-oxide reductase toraOCEPR_RS10945Not AvailablePositive2213248 - 221574091863.5
cytochrome c-type protein torcOCEPR_RS12370Not AvailablePositive2215790 - 221652126308.8
methionyl-trna formyltransferaseOCEPR_RS10955Not AvailableNegative2216518 - 221744433652.8
peptide deformylaseOCEPR_RS10960Not AvailableNegative2217450 - 221804922609.9
ybbr-like domain-containing proteinOCEPR_RS13070Not AvailableNegative2218094 - 221896631110.1
diadenylate cyclase cdaaOCEPR_RS10970Not AvailableNegative2218953 - 221968426927.0
phosphopentomutaseOCEPR_RS10975Not AvailableNegative2219738 - 222088641935.7
hypothetical proteinOCEPR_RS10980Not AvailableNegative2220958 - 222147018074.8
Trna-metNot AvailableNot AvailablePositive2221744 - 2221820Not Available

Displaying genes 2231 – 2240 of 2456 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.