Oceanithermus profundus DSM 14977

Gram-negativeBacilliNon-motileMicroaerophilic

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Thermales

Family

Thermaceae

Genus

Oceanithermus

Description

Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) is an moderately thermophilic, organotrophic, microaerophilic, facultatively chemolithotrophic, Gram-positive bacterium isolated from a deep-sea hydrothermal vent site at 13 degrees N in the East Pacific Rise. Cells are Gram-negative, non-motile rods. The organism grows in the temperature range between 40 and 68 degrees Celsius, with an optimum at 60 degrees Celsius, and in the pH range is between 5.5-8.4, with an optimum around pH 7.5. The NaCl concentration for growth is in the range 10-50 g/l, with an optimum at 30 g/l. O. profundus grows chemoorganoheterotrophically with carbohydrates, proteinaceous substrates, organic acids and alcohols using oxygen or nitrate as electron acceptor. Alternatively, it is able to grow lithoheterotrophically with molecular hydrogen as the energy source. (Adapted from PMID: 12807196). (EBI Integr8)

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderThermales
FamilyThermaceae
GenusOceanithermus
SpeciesOceanithermus profundus
StrainDSM 14977

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Oceanithermus profundus DSM 14977
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature60
Temperature rangeThermophilic
HabitatDeep sea- Hydrothermal vent- Marine
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganoheterotroph- Lithoheterotroph- Organotroph
PathogenicityNo

Genome Summary

Oceanithermus profundus DSM 14977, complete sequence.

Gene Summary

Adenine Count

345113 bp

Thymine Count

345497 bp

Guanine Count

806801 bp

Cytosine Count

806529 bp

Genome Length

2303940 bp

Protein-coding Genes

2254 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinOCEPR_RS09915Not AvailablePositive1993933 - 199459525099.2
1-deoxy-d-xylulose-5-phosphate synthaseOCEPR_RS09920Not AvailablePositive1994604 - 199646366893.5
dna replication/repair protein recfOCEPR_RS09925Not AvailableNegative1996460 - 199749438110.0
macro domain-containing proteinOCEPR_RS09930Not AvailableNegative1997491 - 199797016756.1
dcia family proteinOCEPR_RS09935Not AvailablePositive1998006 - 199881529707.1
branched-chain amino acid transaminaseOCEPR_RS09940Not AvailablePositive1998868 - 199980934280.0
mfs transporterOCEPR_RS09945Not AvailableNegative1999855 - 200104841604.0
ferritinOCEPR_RS12875Not AvailablePositive2001138 - 200164718599.8
peptide-methionine (s)-s-oxide reductase msraOCEPR_RS12880Not AvailablePositive2001644 - 200216819583.3
hypothetical proteinOCEPR_RS12885Not AvailablePositive2002369 - 200347241996.2

Displaying genes 2011 – 2020 of 2456 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.