Oceanithermus profundus DSM 14977

Gram-negativeBacilliNon-motileMicroaerophilic

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Thermales

Family

Thermaceae

Genus

Oceanithermus

Description

Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) is an moderately thermophilic, organotrophic, microaerophilic, facultatively chemolithotrophic, Gram-positive bacterium isolated from a deep-sea hydrothermal vent site at 13 degrees N in the East Pacific Rise. Cells are Gram-negative, non-motile rods. The organism grows in the temperature range between 40 and 68 degrees Celsius, with an optimum at 60 degrees Celsius, and in the pH range is between 5.5-8.4, with an optimum around pH 7.5. The NaCl concentration for growth is in the range 10-50 g/l, with an optimum at 30 g/l. O. profundus grows chemoorganoheterotrophically with carbohydrates, proteinaceous substrates, organic acids and alcohols using oxygen or nitrate as electron acceptor. Alternatively, it is able to grow lithoheterotrophically with molecular hydrogen as the energy source. (Adapted from PMID: 12807196). (EBI Integr8)

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderThermales
FamilyThermaceae
GenusOceanithermus
SpeciesOceanithermus profundus
StrainDSM 14977

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Oceanithermus profundus DSM 14977
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature60
Temperature rangeThermophilic
HabitatDeep sea- Hydrothermal vent- Marine
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganoheterotroph- Lithoheterotroph- Organotroph
PathogenicityNo

Genome Summary

Oceanithermus profundus DSM 14977, complete sequence.

Gene Summary

Adenine Count

345113 bp

Thymine Count

345497 bp

Guanine Count

806801 bp

Cytosine Count

806529 bp

Genome Length

2303940 bp

Protein-coding Genes

2254 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prepilin-type n-terminal cleavage/methylation domain-containing proteinOCEPR_RS08885Not AvailablePositive1772819 - 177322614306.4
pilw family proteinOCEPR_RS08890Not AvailablePositive1773242 - 177402127969.5
2-oxoacid:acceptor oxidoreductase subunit alphaOCEPR_RS08895Not AvailablePositive1774083 - 177594266029.0
thiamine pyrophosphate-dependent enzymeOCEPR_RS08900Not AvailablePositive1775951 - 177687433592.4
3-phosphoshikimate 1-carboxyvinyltransferaseOCEPR_RS08905Not AvailablePositive1776881 - 177822446991.5
dhh family phosphoesteraseOCEPR_RS08910Not AvailablePositive1778236 - 177923436306.2
glycerate kinaseOCEPR_RS08915Not AvailableNegative1779621 - 178087143768.0
laci family dna-binding transcriptional regulatorOCEPR_RS08920Not AvailablePositive1781030 - 178201333993.8
abc transporter substrate-binding proteinOCEPR_RS08925Not AvailablePositive1782010 - 178334148901.7
carbohydrate abc transporter permeaseOCEPR_RS08930Not AvailablePositive1783402 - 178466146571.7

Displaying genes 1801 – 1810 of 2456 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.