Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Litoreibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Litoreibacter |
| Species | Litoreibacter janthinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
803015 bp
Thymine Count
792940 bp
Guanine Count
1073818 bp
Cytosine Count
1084620 bp
Genome Length
3754758 bp
Protein-coding Genes
3700 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein ompu | SAMN04488002_0774 | Not Available | Positive | 754794 - 755816 | 33665.7 |
| outer membrane protein ompu | SAMN04488002_0775 | Not Available | Positive | 756014 - 756970 | 32090.9 |
| hypothetical protein | SAMN04488002_0776 | Not Available | Positive | 757076 - 757735 | 24067.8 |
| l,d-peptidoglycan transpeptidase ykud, erfk/ybis/ycfs/ynhg family | SAMN04488002_0777 | Not Available | Negative | 757725 - 758222 | 18451.0 |
| gtp cyclohydrolase ii | SAMN04488002_0778 | Not Available | Negative | 758219 - 759298 | 38384.4 |
| two component transcriptional regulator, winged helix family | SAMN04488002_0779 | Not Available | Positive | 759460 - 760146 | 25741.0 |
| transmembrane secretion effector | SAMN04488002_0780 | Not Available | Negative | 760273 - 761526 | 44444.0 |
| exodeoxyribonuclease-3 | SAMN04488002_0781 | Not Available | Positive | 761597 - 762385 | 29371.6 |
| thioredoxin | SAMN04488002_0782 | Not Available | Positive | 762439 - 763356 | 32189.1 |
| hypothetical protein | SAMN04488002_0783 | Not Available | Positive | 763378 - 764025 | 24626.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
