Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Litoreibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Litoreibacter |
| Species | Litoreibacter janthinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
803015 bp
Thymine Count
792940 bp
Guanine Count
1073818 bp
Cytosine Count
1084620 bp
Genome Length
3754758 bp
Protein-coding Genes
3700 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488002_0379 | Not Available | Negative | 360532 - 361503 | 36140.2 |
| polysaccharide deacetylase | SAMN04488002_0380 | Not Available | Negative | 361524 - 362615 | 39475.1 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488002_0381 | Not Available | Positive | 362726 - 364204 | 52804.5 |
| o-antigen ligase like membrane protein | SAMN04488002_0382 | Not Available | Positive | 364201 - 365682 | 55486.1 |
| polysaccharide lyase | SAMN04488002_0383 | Not Available | Positive | 365679 - 366557 | 33522.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488002_0384 | Not Available | Negative | 366554 - 367813 | 47084.9 |
| gdp-mannose 6-dehydrogenase | SAMN04488002_0385 | Not Available | Negative | 367814 - 369088 | 45252.2 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN04488002_0386 | Not Available | Negative | 369190 - 369885 | 25855.2 |
| flagellar p-ring protein precursor flgi | SAMN04488002_0387 | Not Available | Negative | 370353 - 371453 | 38395.7 |
| flagellar hook-associated protein 3 flgl | SAMN04488002_0388 | Not Available | Negative | 371450 - 372457 | 35350.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
