Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Litoreibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Litoreibacter |
| Species | Litoreibacter janthinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
803015 bp
Thymine Count
792940 bp
Guanine Count
1073818 bp
Cytosine Count
1084620 bp
Genome Length
3754758 bp
Protein-coding Genes
3700 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN04488002_3585 | Not Available | Negative | 3525817 - 3527220 | 50310.0 |
| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (e3) component | SAMN04488002_3586 | Not Available | Negative | 3527245 - 3528663 | 50449.0 |
| uncharacterized membrane protein ydjx, tvp38/tmem64 family, snare-associated domain | SAMN04488002_3587 | Not Available | Negative | 3528667 - 3529401 | 26157.8 |
| lsu ribosomal protein l34p | SAMN04488002_3588 | Not Available | Positive | 3529675 - 3529812 | 5161.47 |
| ribonuclease p protein component | SAMN04488002_3589 | Not Available | Positive | 3529858 - 3530238 | 13918.9 |
| hypothetical protein | SAMN04488002_3590 | Not Available | Positive | 3530235 - 3530456 | 7948.66 |
| protein of unknown function | SAMN04488002_3591 | Not Available | Negative | 3530465 - 3530992 | 19815.2 |
| trna 2-thiocytidine biosynthesis protein ttca | SAMN04488002_3592 | Not Available | Positive | 3531080 - 3531970 | 33694.5 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN04488002_3593 | Not Available | Positive | 3532029 - 3533552 | 55512.5 |
| protein translocase subunit yidc | SAMN04488002_3594 | Not Available | Positive | 3533671 - 3535497 | 67191.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
