Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Litoreibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Litoreibacter |
| Species | Litoreibacter janthinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
803015 bp
Thymine Count
792940 bp
Guanine Count
1073818 bp
Cytosine Count
1084620 bp
Genome Length
3754758 bp
Protein-coding Genes
3700 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s iron-sulfur cluster binding domain-containing protein | SAMN04488002_1934 | Not Available | Negative | 1891434 - 1891718 | 10189.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488002_1935 | Not Available | Negative | 1891715 - 1892614 | 32840.6 |
| gluconolactonase | SAMN04488002_1936 | Not Available | Negative | 1892619 - 1893497 | 32147.1 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN04488002_1937 | Not Available | Negative | 1893485 - 1894660 | 40726.6 |
| hypothetical protein | SAMN04488002_1938 | Not Available | Positive | 1894741 - 1896078 | 47254.5 |
| uncharacterized conserved protein, duf849 family | SAMN04488002_1939 | Not Available | Positive | 1896082 - 1896960 | 31495.1 |
| transcriptional regulator, iclr family | SAMN04488002_1940 | Not Available | Negative | 1896963 - 1897751 | 28505.7 |
| protocatechuate 3,4-dioxygenase alpha subunit | SAMN04488002_1941 | Not Available | Positive | 1897826 - 1898425 | 21552.0 |
| protocatechuate 3,4-dioxygenase beta subunit | SAMN04488002_1942 | Not Available | Positive | 1898429 - 1899097 | 24731.2 |
| phenol 2-monooxygenase | SAMN04488002_1943 | Not Available | Negative | 1899143 - 1901017 | 68665.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
