Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 is a Gram-negative, rod-shaped bacterium that typically exists in a variety of cellular arrangements, including singles, pairs, and chains. As a nonsporulating organism, it does not form spores and is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. This strain is a chemoheterotroph, relying on organic compounds as its energy source, which aligns with its habitat being host-associated. Optimal growth of K. pneumoniae subsp. rhinoscleromatis occurs at 37°C, a temperature that is consistent with the physiological conditions found in mammalian hosts. The adaptability of this bacterium to different oxygen levels and its ability to utilize various organic substrates suggest its potential for persistence in diverse microenvironments within host tissues. Understanding the traits of K. pneumoniae subsp. rhinoscleromatis, particularly its facultative anaerobic metabolism and host-associated habitat, may provide insights into its ecological roles in the human microbiome and its interactions with the immune system. This adaptability underscores the complexity of host-microbe relationships and may influence future research on microbial dynamics in health and disease contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainsubsp. rhinoscleromatis ATCC 13884

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884

Gene Summary

Adenine Count

1135286 bp

Thymine Count

1123487 bp

Guanine Count

1472183 bp

Cytosine Count

1549719 bp

Genome Length

5280675 bp

Protein-coding Genes

5490 genes

Non-Coding Genes

266 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion atpase, clpv1 familyHMPREF0484_3101Q9I742Negative2930553 - 293315394937.2
type vi secretion system effector, hcp1 familyHMPREF0484_3102Not AvailableNegative2933472 - 293397819322.7
ompa family proteinHMPREF0484_3103Not AvailableNegative2933968 - 293567461958.9
type iv / vi secretion system protein, dotu familyHMPREF0484_3104Not AvailableNegative2935671 - 293636025577.0
type vi secretion protein, vc_a0114 familyHMPREF0484_3105Not AvailableNegative2936357 - 293770050556.0
type vi secretion protein, evpb/vc_a0108 familyHMPREF0484_3106Q9I748Negative2937710 - 293926058231.1
type vi secretion protein, vc_a0107 familyHMPREF0484_3107Not AvailableNegative2939297 - 293978818432.2
intracellular protease, pfpi familyHMPREF0484_3108Q9M8R4Positive2940430 - 294099620160.2
hd domain proteinHMPREF0484_3109Q58554Negative2941195 - 294272758973.0
oxidoreductase, short chain dehydrogenase/reductase family proteinHMPREF0484_3110Q9SQR4Negative2942944 - 294373527853.6

Displaying genes 3291 – 3300 of 5756 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

357 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da

Displaying 1–10 of 357 metabolites

Health Effects

No health effects information available for this bacterium.