Thermodesulfatator indicus DSM 15286

BacilliNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Thermodesulfobacteria

Order

Thermodesulfobacteriales

Family

Thermodesulfatatoraceae

Genus

Thermodesulfatator

Description

Thermodesulfatator indicus DSM 15286. This organism is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassThermodesulfobacteria
OrderThermodesulfobacteriales
FamilyThermodesulfatatoraceae
GenusThermodesulfatator
SpeciesThermodesulfatator indicus
StrainDSM 15286

Profile

Physiology
Gram staining propertiesGram-negative
ShapeBacilli
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Image of Thermodesulfatator indicus DSM 15286
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature70
Temperature rangeThermophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains- Pairs
SporulationNonsporulating
Energy sourceChemolithoautotroph
PathogenicityNot Available

Genome Summary

Thermodesulfatator indicus DSM 15286, complete sequence.

Gene Summary

Adenine Count

667743 bp

Thymine Count

669267 bp

Guanine Count

488204 bp

Cytosine Count

497010 bp

Genome Length

2322224 bp

Protein-coding Genes

2228 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-aspartate oxidaseTHEIN_RS01010Q51363Positive202479 - 20410760740.6
ammonium transporterTHEIN_RS01015O28528Positive204448 - 20581548593.8
p-ii family nitrogen regulatorTHEIN_RS01020O26760Positive205821 - 20615912430.1
prepilin-type n-terminal cleavage/methylation domain-containing proteinTHEIN_RS12430Not AvailableNegative206626 - 20700613744.5
prepilin-type n-terminal cleavage/methylation domain-containing proteinTHEIN_RS12435Not AvailableNegative207242 - 20761913302.8
gtpase hflxTHEIN_RS01035Q04PB3Positive208674 - 21035364140.1
trna pseudouridine(55) synthase trubTHEIN_RS01040Q2LWU1Negative210490 - 21141934056.0
bifunctional oligoribonuclease/pap phosphatase nrnaTHEIN_RS01045Q5SM25Negative211416 - 21237535142.2
30s ribosome-binding factor rbfaTHEIN_RS01050B9KZ59Negative212368 - 21271513634.3
duf503 domain-containing proteinTHEIN_RS01055Not AvailableNegative212718 - 21300810816.3

Displaying genes 201 – 210 of 2284 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

168 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da

Displaying 1–10 of 168 metabolites

Health Effects

No health effects information available for this bacterium.