Rhodanobacter denitrificans str. 2APBS1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Rhodanobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusRhodanobacter
SpeciesRhodanobacter denitrificans
Strain2APBS1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodanobacter denitrificans, complete sequence.

Gene Summary

Adenine Count

686513 bp

Thymine Count

688704 bp

Guanine Count

1423251 bp

Cytosine Count

1427022 bp

Genome Length

4225490 bp

Protein-coding Genes

3843 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chrr family anti-sigma-e factorR2APBS1_RS00980Not AvailableNegative238665 - 23932723504.2
sigma-70 family rna polymerase sigma factorR2APBS1_RS00985Not AvailableNegative239324 - 23990221827.2
hypothetical proteinR2APBS1_RS00990Not AvailableNegative240148 - 2403246487.4
nad(p)/fad-dependent oxidoreductaseR2APBS1_RS00995Not AvailablePositive241144 - 24246347900.8
electron transfer flavoprotein-ubiquinone oxidoreductaseR2APBS1_RS01000Not AvailablePositive242574 - 24422059895.6
succinate dehydrogenase iron-sulfur subunitR2APBS1_RS01005Not AvailableNegative244587 - 24536629384.3
succinate dehydrogenase flavoprotein subunitR2APBS1_RS01010Not AvailableNegative245426 - 24722264886.1
succinate dehydrogenase, hydrophobic membrane anchor proteinR2APBS1_RS01015Not AvailableNegative247255 - 24766214987.5
succinate dehydrogenase, cytochrome b556 subunitR2APBS1_RS01020Not AvailableNegative247659 - 24819519786.2
hypothetical proteinR2APBS1_RS01025Not AvailableNegative248424 - 24876212114.3

Displaying genes 281 – 290 of 3950 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.