Rhodanobacter denitrificans str. 2APBS1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Rhodanobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusRhodanobacter
SpeciesRhodanobacter denitrificans
Strain2APBS1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodanobacter denitrificans, complete sequence.

Gene Summary

Adenine Count

686513 bp

Thymine Count

688704 bp

Guanine Count

1423251 bp

Cytosine Count

1427022 bp

Genome Length

4225490 bp

Protein-coding Genes

3843 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferaseR2APBS1_RS07340Not AvailableNegative1626840 - 162802741908.5
2-oxoglutarate dehydrogenase e1 componentR2APBS1_RS07345Not AvailableNegative1628112 - 1630952103973.0
gnat family n-acetyltransferaseR2APBS1_RS07350Not AvailableNegative1631270 - 163222035025.6
cupin domain-containing proteinR2APBS1_RS07355Not AvailableNegative1632217 - 163341344548.2
sulfite exporter taue/safe family proteinR2APBS1_RS07360Not AvailableNegative1633448 - 163420025012.0
assimilatory sulfite reductase (nadph) flavoprotein subunitR2APBS1_RS07365Not AvailablePositive1634403 - 163617264260.2
assimilatory sulfite reductase (nadph) hemoprotein subunitR2APBS1_RS07370Not AvailablePositive1636252 - 163794962145.2
phosphoadenylyl-sulfate reductaseR2APBS1_RS07375Not AvailablePositive1637946 - 163866827187.4
lysr substrate-binding domain-containing proteinR2APBS1_RS07380Not AvailableNegative1638727 - 163972236105.4
siroheme synthase cysgR2APBS1_RS07385Not AvailablePositive1640024 - 164148451805.9

Displaying genes 1561 – 1570 of 3950 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.