Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | RCA23_RS04775 | Not Available | Negative | 1001247 - 1002406 | 44310.0 |
| yjbh domain-containing protein | RCA23_RS16740 | Not Available | Negative | 1002638 - 1002796 | 6469.88 |
| hypothetical protein | RCA23_RS04785 | Not Available | Negative | 1002938 - 1003684 | 26590.9 |
| lrgb family protein | RCA23_RS04795 | Not Available | Negative | 1003728 - 1004444 | 24774.0 |
| cida/lrga family protein | RCA23_RS04800 | Not Available | Negative | 1004441 - 1004794 | 12409.2 |
| aminotransferase class iv | RCA23_RS04805 | Not Available | Negative | 1004916 - 1005815 | 32983.4 |
| nad(p)-dependent oxidoreductase | RCA23_RS04810 | Not Available | Negative | 1005865 - 1006761 | 31575.9 |
| multidrug effflux mfs transporter | RCA23_RS04815 | Not Available | Negative | 1006908 - 1008113 | 43547.9 |
| duf3429 domain-containing protein | RCA23_RS04820 | Not Available | Negative | 1008187 - 1008660 | 17155.3 |
| cryptochrome/photolyase family protein | RCA23_RS04825 | Not Available | Negative | 1008657 - 1010198 | 58784.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
