Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf411 domain-containing protein | RCA23_RS04735 | Not Available | Positive | 990785 - 991279 | 17516.0 |
| hypothetical protein | RCA23_RS16405 | Not Available | Positive | 991576 - 991869 | 10096.7 |
| hypothetical protein | RCA23_RS16205 | Not Available | Positive | 992104 - 992391 | 10789.8 |
| hypothetical protein | RCA23_RS04745 | Not Available | Negative | 992584 - 993405 | 30691.9 |
| hypothetical protein | RCA23_RS04750 | Not Available | Negative | 993512 - 993934 | 15651.3 |
| is630 family transposase | RCA23_RS04755 | Not Available | Positive | 994038 - 995099 | 40658.7 |
| lysr family transcriptional regulator | RCA23_RS04760 | Not Available | Negative | 995158 - 996057 | 33344.6 |
| ig-like domain-containing protein | RCA23_RS04765 | Not Available | Positive | 996333 - 999947 | 127375.0 |
| hypothetical protein | RCA23_RS16410 | Not Available | Positive | 1000054 - 1000206 | 5692.27 |
| alpha/beta hydrolase-fold protein | RCA23_RS04770 | Not Available | Positive | 1000230 - 1001186 | 35940.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
